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Table 4 Comparative values: conventional versus LCA model results

From: Visual inspection with acetic acid as a cervical cancer test: accuracy validated using latent class analysis

Reference standard

Disease prevalence (± SE)

Test positive

Sensitivity (± SE) (*)

Specificity (± SE)

1. Colposcopy/Biopsy LGSIL+

0.233

(0.009)

VIA Abnormal, CA

0.640 (0.022)

0.671 (0.012)

  

Pap LGSIL +

0.298 (0.021)

0.923 (0.007)

  

HPV >= 1.0 RLU

0.649 (0.022)

0.638 (0.012)

2. Colposcopy/Biopsy HGSIL+

0.096

(0.006)

VIA Abnormal, CA

0.775 (0.030)

0.639 (0.011)

  

Pap LGSIL +

0.445 (0.035)

0.905 (0.007)

  

HPV >= 1.0 RLU

0.800 (0.028)

0.613 (0.011)

3. LCA disease derived from Trichotomous (†) VIA, Pap, HPV, including colposcopy/biopsy: 2 class solution

0.302

(0.028)

VIA Abnormal, CA

0.637

0.701

  

Pap LGSIL +

0.417

0.997

  

HPV >= 1.0 RLU

0.973

0.807

  

Colposcopy/Biopsy LGSIL+ (‡)

0.442

0.857

  

Colposcopy/Biopsy HGSIL+

0.251

0.970

4. LCA disease derived from Trichotomous (†) VIA, Pap, HPV, including colposcopy/biopsy: 3 class solution

0.118 (§)

(0.022)

VIA Abnormal, CA

0.744

0.568

  

Pap LGSIL+

0.560

0.820

  

HPV >= 1.0 RLU

0.972

0.568

  

Colposcopy/Biopsy LGSIL+

0.926

0.758

  

Colposcopy/Biopsy HGSIL+

0.632

0.860

  1. (*) Standard errors (SE) are not given for the LCA-derived sensitivity and specificity estimates because some of these estimates are themselves calculated from combinations of conditional probabilities, which have individual maximum-likelihood estimated (MLE) standard errors. The MLE standard errors for these component conditional probabilities are given in Figures 1 and 2, in parentheses.
  2. (†) Trichotomous response codes are used to define the latent classes, but results are re-interpreted dichotomously in order to calculate sensitivity and specificity estimates.
  3. (‡) Results are given for Colposcopy/Biopsy with a low threshold (LGSIL+ is test positive, as it would be for Pap smears), and also with a high threshold (HGSIL+) as the latter is the threshold at which the gold standard for VIA testing is usually set when using the traditional formula.
  4. (§) Prevalence of class 3 (disease) in a 3-class model; all other LCA prevalence estimates are from 2-class models.