From: Reporting of Human Genome Epidemiology (HuGE) association studies: An empirical assessment
Reporting characteristic | Count | Percent |
---|---|---|
Reported that all genetic variants were examined for Hardy-Weinberg equilibrium | Â | Â |
   No | 164 | 52.1 |
   Yes | 151 | 47.9 |
If Hardy-Weinberg equilibrium was reported, did any polymorphism reportedly fail Hardy-Weinberg equilibrium (n = 151) | Â | Â |
   No | 141 | 93.4 |
   Yes | 10 | 6.6 |
Summary data reported on all genetic variants of interest for all outcomes | Â | Â |
   No | 41 | 13.0 |
   Yes | 274 | 87.0 |
Reported that analyses were conducted by using allele-based genetic comparisons | Â | Â |
   No | 143 | 45.4 |
   Yes | 172 | 54.6 |
Reported that analyses were conducted by using genotype-based genetic comparisons | Â | Â |
   No | 45 | 14.3 |
   Yes | 270 | 85.7 |
If the analyses were conducted by using genotypes, were selected comparisons or all possible comparisons assessed (n = 270) | Â | Â |
   All possible | 214 | 79.3 |
   Selected | 56 | 20.7 |
Justifications given for the selection of specific genetic comparisons (n = 56) | Â | Â |
   No | 33 | 58.9 |
   Yes | 23 | 41.1 |
Adjustment for multiple comparisons used | Â | Â |
   No | 276 | 87.6 |
   Yes | 39 | 12.4 |
If an adjustment for multiple comparisons was used, type of adjustment was (n = 40, one article used two methods) | Â | Â |
   Bonferroni | 28 | 70.0 |
   Fischer's post hoc | 1 | 2.5 |
   Monte Carlo simulations | 1 | 2.5 |
   Scheffe's test | 2 | 5.0 |
   Tukey's test | 3 | 7.5 |
   Unknown | 5 | 12.5 |
Authors discussed the public health, medical, or clinical implications of their findings | Â | Â |
   No | 193 | 61.3 |
   Yes (any mention) | 122 | 38.7 |
Authors stated that this is the first study on the specific issue | Â | Â |
   No | 266 | 84.4 |
   Yes | 49 | 15.6 |
Clear reference made to the first study on the specific issue (n = 266) | Â | Â |
   No | 243 | 91.4 |
   Yes | 23 | 8.6 |
Clear reference made to a systematic review | Â | Â |
   No | 297 | 94.3 |
   Yes | 18 | 5.7 |
Clear reference made to a non-systematic review | Â | Â |
   No | 309 | 98.1 |
   Yes | 6 | 1.9 |