| AUC | Precision | Recall | F1 | Type I error |
---|---|---|---|---|---|
Fully observed data | |||||
BART | 0.74 (0.68, 0.80) | 1.00 | 0.62 | 0.70 | NA |
XGBoost | 0.75 (0.69, 0.81) | 1.00 | 0.61 | 0.69 | NA |
Incomplete data: 40% missingness inY and 60% overall missingness | |||||
RR-BART | 0.73 (0.67, 0.79) | 1.00 | 0.36 | 0.48 | NA |
RR-BART (all selected) | 0.97 (0.95, 0.99) | 1.00 | 1.00 | 1.00 | NA |
BI-BART π=0.1 | 0.73 (0.67, 0.79) | 1.00 | 0.38 | 0.50 | NA |
BI-XGB π=0.2 | 0.79 (0.73, 0.85) | 1.00 | 0.54 | 0.64 | NA |
BART Complete cases | 0.50 (0.43, 0.57) | 1.00 | 0.15 | 0.35 | NA |
XGBoost Complete cases | 0.55 (0.48, 0.62) | 1.00 | 0.18 | 0.38 | NA |
MIA-BART (Impute missing Y) | 0.66 (0.60, 0.72) | 1.00 | 0.31 | 0.42 | NA |
MIA-BART (Exclude missing Y) | 0.63 (0.56, 0.70) | 1.00 | 0.25 | 0.40 | NA |
MIA-XGB (Impute missing Y) | 0.73 (0.67, 0.69) | 1.00 | 0.50 | 0.59 | NA |
MIA-XGB (Exclude missing Y) | 0.70 (0.62, 0.77) | 1.00 | 0.46 | 0.55 | NA |
Incomplete data: 20% missingness inY and 30% overall missingness | |||||
RR-BART | 0.77 (0.72, 0.82) | 1.00 | 0.51 | 0.67 | NA |
RR-BART (all selected) | 0.98 (0.96, 0.99) | 1.00 | 1.00 | 1.00 | NA |
BI-BART π=0.1 | 0.75 (0.70, 0.80) | 1.00 | 0.50 | 0.69 | NA |
BI-XGB π=0.2 | 0.80 (0.75, 0.85) | 1.00 | 0.52 | 0.70 | NA |
MIA-BART (Impute missing Y) | 0.70 (0.65, 0.75) | 1.00 | 0.46 | 0.60 | NA |
MIA-BART (Exclude missing Y) | 0.67 (0.61, 0.73) | 1.00 | 0.43 | 0.57 | NA |
MIA-XGB (Impute missing Y) | 0.70 (0.65, 0.75) | 1.00 | 0.46 | 0.64 | NA |
MIA-XGB (Exclude missing Y) | 0.67 (0.61, 0.73) | 1.00 | 0.42 | 0.61 | NA |
BART Complete cases | 0.54 (0.49, 0.59) | 1.00 | 0.16 | 0.39 | NA |
XGBoost Complete cases | 0.56 (0.51, 0.61) | 1.00 | 0.20 | 0.40 | NA |