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Table 3 Characteristics of the measures implemented to evaluate the prediction ability of a model

From: Added predictive value of omics data: specific issues related to validation illustrated by two case studies

Aspect

Measure

Characteristics

Discriminative ability

Kaplan-Meier curves for risk groups

Better with greater distance between the Kaplan-Meier curves for the low- and high risk groups

 

C-index

Estimates the concordance probability, i.e. the probability that the score correctly orders two patients with respect to their survival time; higher values correspond to better prediction

 

K-statistic

Alternative to the C-index; works only under the proportional hazards assumption

Calibration

Survival curves

Compares the observed survival function with the average predicted curve

 

Calibration slope

Computes the regression coeffcient of the prognostic score as unique predictor; the best values are those close to 1; related to overfitting issues

Overall prediction

Prediction error curves

Presents the Brier score versus time; the closer the curves are to the X-axis, the better the prediction

 

Integrated Brier score

Computes the area under the prediction error curves; the smaller is the value, the better the prediction