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Table 3 Results obtained with the DTComPair package

From: Compbdt: an R program to compare two binary diagnostic tests subject to a paired design

Confidence intervals for the parameters of each diagnostic test (95% confidence)

 

Test 1

Test 2

Sensitivity

79.550%; 85.582%

88.857%; 93.380%

Specificity

68.853%; 79.436%

69.665%; 80.145%

Positive LR

2.594; 3.931

2.942; 4.481

Negative LR

0.195; 0.284

0.091; 0.154

Positive PV

85.409%; 90.731%

86.927%; 91.783%

Negative PV

59.388%; 70.180%

73.403%; 83.570%

Comparison of the parameters of the two diagnostic tests (α = 5%)

Sensitivities

McNemar test statisics: test statistic = 24.582, p ‐ value = 0

Exact test: p ‐ value = 0

95% Tango confidence interval for Se2 − Se1: 5.278%; 11.966

Specificities

McNemar test: test statistic = 0.044, p ‐ value = 0.833

Exact test: two ‐ sided p ‐ value = 0.916

Likelihood ratios (Method of Leisenring et al. [21] and Pepe [1])

Positive LRs: test statistic =  − 0.898, p ‐ value = 0.369

Negative LRs: test statistic = 4.663, p ‐ value = 0

95% confidence interval for NLR1/NLR2: 1.487; 2.644

Predictive values (Method of Leisenring et al. [13])

Positive PVs: test statistic = 0.802, p ‐ value = 0.371

Negative PVs: test statistic = 23.579, p ‐ value = 0

Predictive values (Method of Kosinski [14])

Positive PVs: test statistic = 0.807, p ‐ value = 0.369

Negative PVs: test statistic = 22.502, p ‐ value = 0

Relative predictive values (Method of Moskowitz and Pepe [22])

Positive PVs: test statistic =  − 0.895, p ‐ value = 0.371

Negative PVs: test statistic =  − 4.737, p ‐ value = 0

95% confidence interval for NPV1/NPV2: 0.762; 0.894