Reporting of heterogeneity of treatment effect in cohort studies: a review of the literature
BMC Medical Research Methodology volume 18, Article number: 10 (2018)
This article corresponds to a literature review and analyze how heterogeneity of treatment (HTE) is reported and addressed in cohort studies and to evaluate the use of the different measures to HTE analysis.
prospective cohort studies, in English language, measuring the effect of a treatment (pharmacological, interventional, or other) published among 119 core clinical journals (defined by the National Library of Medicine) in the last 16 years were selected in the following data source: Medline. One reviewer randomly sampled journal articles with 1: 1 stratification by journal type: high impact journals (the New England Journal of Medicine, JAMA, LANCET, Annals of Internal Medicine, BMJ and Plos Medicine) and low impact journal (the remaining journals) to identify 150 eligible studies. Two reviewers independently and in duplicate used standardized piloted forms to screen study reports for eligibility and to extract data. They also used explicit criteria to determine whether a cohort study reported HTE analysis. Logistic regression was used to examine the association of prespecified study characteristics with reporting versus not reporting of heterogeneity of treatment effect.
One hundred fifty cohort studies were included of which 88 (58%) reported HTE analysis. High impact journals (Odds Ratio: 3.5, 95% CI: 1.78–7.5; P < 0.001), pharmacological studies (Odds Ratio: 0.26, 95% CI: 0.13–0.51; P < 0.001) and studies published after 2014 (Odds Ratio: 0.5, 95% CI: 0.25–0.97; P = 0.004) were associated with more frequent reporting of HTE. 27 (31%) studies which reported HTE used an interaction test.
More than half cohort studies report some measure of heterogeneity of treatment effect. Prospective cohort studies published in high impact journals, with large sample size, or studying a pharmacological treatment are associated with more frequent HTE reporting. The source of funding was not associated with HTE reporting. There is a need for guidelines on how to perform HTE analyses in cohort studies.
There are different ways to improve patient care. The first one is to develop innovative health-care interventions and this has been the leading contributor for medical improvement so far. The second possibility is to target known, or new, health-care interventions to subgroup of patients where the treatment is more likely to be beneficial. Because patients vary in characteristics such as sex, age, past medical history, genetics, disease severity, presence of comorbidities, concomitant exposures, and other pre-treatment variables, it can be hypothesized that a treatment that has little effect on an unselected group of patients, becomes extremely effective on a specific subgroup of patients. The use of BRAF (BRAF is a human gene that encodes a protein called B-Raf involved in sending signals inside cells that direct cell growth) kinase inhibitor in patients with BRAF mutated metastatic melanoma is one such recent example .
Consequently, when reporting on the effect of a treatment, researchers may feel the need to look for subgroup of patients where the effect may differ, either positively or negatively, from that of the other patients. This has been labeled as heterogeneity of treatment effect, namely nonrandom, explainable variability in the direction or magnitude of treatment effects for individuals within a population. Measuring or reporting heterogeneity of treatment effect is widely performed in the randomized trial literature with almost two-third of cardiovascular trials and about one-third of surgical trials reporting such analyses . However, sub-group analyses (a means of assessing heterogeneity of treatment effect) are problematic because they are associated with inflation of type one error, and consequently with reporting of spurious effects, and with poorly controlled type two error, and consequently with a risk for overlooking potential significant heterogeneity . More recently, Sun and colleagues have published an article addressing the issue of measuring and reporting subgroup analyses in randomized controlled trials [4, 5]. They found that almost half randomized trials in a random sample of core clinical journal reported a subgroup analysis with a significant variation in the reporting according to the source of funding, the significance of the main analysis, the sample size, and the impact factor of the journal. Little is known, however, about the measuring and reporting of heterogeneity of treatment effect in cohort studies.
Cohort studies are frequently used to measure the association of a treatment and performing subgroup analyses is likely performed as well. The main advantage of experimental cohort studies over randomized trials is that they usually allow the enrollment of patients who present significant comorbidities or are more fragile, physically, psychologically or socially than those included in randomized designs . Cohort studies have, however, significant drawbacks compared to randomized trials. Mainly, cohort studies are susceptible to selection biases that affect the principal comparison and will also affect any subgroup analyses. This can lead to apparent heterogeneity in treatment effect when there is none or conceal a true difference of effect between categories of patients. Cohort studies are inclined to confounding by indication, therefore subgroups of interest may be identified not because the effect of treatment differs, but because their risk profile differ .
Therefore, we decided to perform a review of prospective interventional cohort studies to estimate the proportion of studies reporting a measure of the heterogeneity of treatment effect and identify variables associated with reporting of this heterogeneity.
Protocol and registration
Eligibility criteria, information sources, data items and methods of the analysis were specified in advance and documented in a protocol. Prisma guidelines were followed .
We considered prospective, controlled, cohort studies, measuring the effect of a health care intervention on humans, published in a core clinical journal (as defined by the National Library of Medicine), in the English language. Pharmacokinetic analyses, letters, reviews/meta-analyses, and studies published before 2000 were not considered eligible. The core clinical journals defined by the National Library of medicine, known as the Abridged Index Medicus, included 119 journals in 2015, covering all specialties of clinical medicine and public health sciences . There were no restrictions of participants based on age, sex, socio-economic status, medical condition, associated comorbidities, or other variables. Interventions considered were pharmacological (any treatment where the effect is expected from a drug), interventional (any treatment where the effect is expected from a mechanical cause; for instance a surgical procedure, a rehabilitation program, an angioplasty) or other (any treatment where the effect is expected neither uniquely from a drug nor from a mechanical cause; for instance a psychological intervention, a blood transfusion, a complex intervention encompassing multiple interventions such as a resuscitation method). All types of outcome were considered including time to event, binary and continuous outcomes. The primary outcome was considered for all analyses; in case the primary outcome was not clearly indicated, the first outcome reported in the method section was considered.
Information sources, search strategy and study selection
Studies were identified by searching Medline via PubMed by two reviewers starting from March 2016 and moving backwards in time until the predefined number of studies was completed. Journals were stratified into high and low impact groups. The six high impact journals were Annals of Internal Medicine , British Medical Journal , Journal of the American Medical Association (JAMA) , Lancet , New England Journal of Medicine , and Plos Medicine . The low impact journals were the 113 other core clinical journals from the Abridged Index Medicus. The objective was to obtain a total of 150 studies, with 75 in each group. High impact journal studies were identified by generating a random vector of 75 names among the six possible categories; each of the six journals had the same probability of being selected per draw; in case the year 2000 was reached for a journal, the missing number of studies were distributed among other less populated journals. Low impact journal studies were identified by generating a random list of 75 with each journal having a similar probability of being selected per draw; multiple selections (the fact that one journal may contribute to more than one study) were accepted and consequently some core clinical journal would not contribute.
Eligible studies were identified with the following search terms on PubMed « Name of the journal[TA] AND « prospective » AND « cohort study ». The term «Name of the journal[TA]» was replaced by the relevant journal name as randomly selected in the previous step. Hits (n = 2019) were reviewed within each journal on title and abstract and then on full text for selection criteria until the adequate number of studies was reached.
Data collection process
We developed a data extraction sheet, pilot-tested it on ten randomly-selected included studies, and refined it accordingly. Two reviewers (MD, CS) extracted the relevant data from all included studies. Disagreements between the reviewers were resolved by consensus, and if necessary, consultation with an arbitrator (DB). Authors were not contacted for further information. Only the materials and methods section, results section, tables and figures were reviewed; the introduction and discussion sections were not read through; an exception was made for source of funding (see below).
Reviewers also identified a pair-wise comparison of interest, using the following strategy. If there were only two groups, these groups were considered for the analysis. If there were more than two groups, the comparison that was clearly and explicitly defined as the primary comparison in the study report was considered only; if the primary comparison was not explicitly defined, we selected the comparison that reported the largest number of HTE analyses for the selected primary outcome.
Heterogeneity of treatment effect was considered if the effect of treatment was reported for all categories of a variable. For instance, if the effect of treatment was reported for men and women separately, or for patients 70 years and older and for those below 70 years old. Heterogeneity of treatment effect was not considered as reported if the effect of treatment was reported for only some of the categories of a variable. For instance, if the effect of treatment was reported for the whole sample under scrutiny, and for men, but not for women. In case an interaction was sought for between a variable and the treatment, and that this interaction was not significant, we considered that heterogeneity of treatment effect was performed even if the effect was not reported among the categories .
We extracted information on sample size, length of follow-up, date of publication, funding source, study area, outcome of interest, significance of the effect on the outcome, prespecification of heterogeneity of treatment effect, predictive variables studied. We also looked at whether predictive variables on side effects were reported.
The variable “date of publication” was dichotomized (based on the 0.5 quantile) into studies published between 2000 and 2013 and studies published between 2014 and 2016.
The source of funding was based on statements reported in the method section, disclosure of conflicts of interest, acknowledgments and funding section of the study report. We categorized the source of funding as private, public, mixed, and none; for presentation, we pooled these categories into private (private and mixed) and other. Study areas considered were pharmacological, interventional, and other as described above. The outcome of interest was categorized into time-to-event, binary, and continuous. Prespecification of heterogeneity of treatment effect was considered if the analysis was reported in the method section. Predictive variables were categorized into: age; sex; socioeconomic level (variables referring to income, education, occupation); comorbidities (variables referring to additional diseases or disorders co-occurring with the disease of interest or a measure of comorbidity); severity of the disease under treatment (variables referring to different levels of advancement of the disease of interest); medical history (variables referring to past medical events, previous diseases, or genetic disorders); others; and the form of treatment (variables referring to different doses or different exposure periods or different administration form of the same treatment). Measuring the effect of different forms of treatment can be regarded as not heterogeneity in the effect of treatment but as heterogeneity in the treatment per se. Therefore, HTE studies include those where the form of treatment only was looked at; however descriptive findings are also reported excluding these studies.
Different types of analysis of HTE have been considered: subgroup (presentation of univariate estimate of each category of the variables); adjusted (presentation of estimates adjusted for the other variables); propension (adjustment for selection bias with propensity score methods).
Risk of bias in individual studies
The Newcastle Ottawa Scale for assessing the quality of non randomized studies was used to rate study quality (Additional file 1). This scale evaluates the quality of the selection and the representativeness of the exposed and non exposed population cohort (four items), the quality of the comparability of cohorts on the basis of the design (one item) and the quality of the assessment of the primary outcome and the adequacy of follow up (three items). Between 0 and 3 total points it was considered as poor quality, between 4 and 6 total points it was considered as moderate quality and between 7 and 8 total points it was considered as good quality of the cohort studies.
Continuous variables are reported as median and first to third quartile values. Categorical variables are reported as counts and proportion. Descriptive analyses are presented for all studies and for categories of relevant study characteristics such as presence of HTE, journal impact factor, and study area. To examine the association of reporting versus not reporting HTE with study characteristics, we carried out univariable and multivariable logistic regression analyses, with reporting HTE as the dependent variable. The following variables were looked at: sample size, length of follow-up, date of publication (<2014 and ≥2014), funding source (private vs other), study area (pharmacological vs non pharmacological), outcome of interest (time-to-event, binary, continuous), significance of the effect on the outcome (yes vs no), journal impact factor (high vs low impact), quality of the study (continuous), analysis of predictive factors on primary outcome (yes vs no) and their prespecification and analysis of predictive factors on side effects (yes vs no). A multivariable model including predictors with some significance (P < 0.2) was then developed. We used the R software version 3.2.2 for all analyses. All comparisons were two tailed, and P < 0.05 was considered statistically significant. We used the Wilcoxon rank sum test for the analysis of continuous data and the chi-square/Fisher tests for binary data.
A sensitivity analysis excluding studies only looking at the heterogeneity in the form of the treatment from the HTE group was performed. We also performed another sensitivity analysis on looking at the heterogeneity of treatment concerning only the studies considered as good quality of cohort studies, depending on the The Newcastle Ottawa Scale.
A total of 150 prospective cohort studies, 75 in high impact and 75 in low impact journals, were identified for inclusion in the review after screening 2019 citations on PubMed (Fig. 1). The year 2000 was reached for the New England Journal of Medicine after 11 cohort studies were retrieved instead of 15 planned and 8 were added to Plos Medicine. Eligible cohorts were identified in low impact journals without the need to correct for numbers.
Overall, the median number of patients included was 1633 (Q1 – Q3: 310–9505), 100 (67%) were funded by the industry, and 89 (60%) reported on the effect of a pharmacological treatment (Table 1). Sixty-five (44%) cohort studies addressed time-to-event data, and the primary comparison was significant for 96 (65%) studies. Eighty-eight (59%) studies rated moderately on the Newcastle-Ottawa quality assessment score, and 57 (38%) good.
Eighty-eight (59%) studies reported HTE and 62 (41%) did not (Table 1). Studies reporting HTE had a larger sample size (P < 0.001) and length of follow up (P < 0.001), were more likely to be found in high impact journals (P < 0.001), more often assessed a pharmacological treatment (P < 0.001) and addressed time-to-event data (P = 0.004). Among the 88 studies reporting on HTE, 84 (95%) pre-specified the analysis in the method section and the most frequent predictive variables evaluated were age (n = 30, 34%), comorbidities (n = 31, 35%) and treatment (n = 66, 75%). Also among the studies reporting HTE, 2(2%) used subgroup analyses, 67(76%) adjusted analysis and 19(22%) propension score methods. An interaction test was performed in 27 studies (18%) . Thirty-nine studies only looked at the heterogeneity of treatment effect in variation of the treatment itself; when excluding these studies from the comparison, there were no differences in the main analysis (Table 1). On multivariable regression analysis, the most important predictors of reporting HTE analysis in the study was the study area (OR: 0.25, 95% CI: 0.09–0.66; P = 0.007) with studies evaluating a pharmacological treatment more likely to report HTE (Table 2).
By design, 75 cohort studies were from high impact journals and 75 were from low impact journals. Of the 88 studies reporting HTE, 55 (73%) were reported in high impact journals studies and 33 (27%) in low impact journals; this difference was statistically significant (P < 0.001) (Table 3). High impact journals studies were more likely to have a larger sample size (P < 0.001) and a longer follow up (P = 0.002) (Table 3). Furthermore, time-to-event data were more frequent in high impact journals (P = 0.001) and results more often significant on the primary outcome analysis (P = 0.02). When HTE was reported, the pre-specification of HTE analysis in high impact journals studies (P = 0.15) and the different type of HTE analysis was similar in both groups; there was no difference in the proportion of variables analyzed for prediction except for medical history (P = 0.03).
Eighty-nine cohort studies (59%) evaluated a pharmacological treatment and 61 (41%) did not (Table 4). Pharmacological studies were larger (P < 0.001) and reported the analysis of predictive factors more often (P < 0.001). Also, there was more industry funded studies in pharmacological studies (p = 0.04). The form of treatment was more often analyzed as a predictive variable in pharmacological studies (p = 0.002) (Table 4).
Risk of bias within studies
A total of 88 (59%) studies, 54 (61%) in the HTE group and 34 (55%) in the non HTE group, rated good on the Newcastle Ottawa Quality Assessment Score with no difference between both groups. However, we found that studies reported in high impact journals had a greater quality score than the studies from low impact journals (P = 0.03) (table 3). The quality assessment score was not associated with the likelihood of reporting HTE (P = 0.82).
A sensitivity analysis excluding studies only looking at the heterogeneity in the form of the treatment from the HTE group revealed no relevant differences from the main analyses. It was the same for the analysis about only the good quality cohort studies (Table 5).
Addressing heterogeneity is an interesting method to increase treatment efficiency and decrease unnecessary side effects and health care costs. Heterogeneity is now rather well documented in randomized controlled trials (RCTs) [18,19,21]. However, cohort studies present different methodological issues which warrant caution when measuring and reporting heterogeneity . Because there was no previous information of how heterogeneity is reported in cohort studies we conducted a review of the literature.
Summary of evidence
We found that 59% of cohort studies reported HTE. This is significantly more than previously reported for randomized trials . Sun and colleagues in a review of 469 trials found that 44% reported a sub-group analysis . Two possible reasons explaining this difference are wider inclusion criteria and less standardized methodology. Cohort studies are known to include patients at the extreme of selection variables. For instance, cohort studies are more likely to include older patients, patients with more comorbidities, and those with more severe diseases . Therefore, given these patients are included in the cohort, investigators may feel more pressed to analyze the effect of treatment in these particular subgroups . Age, sex, and comorbidities were the most frequent variables assessed for heterogeneity in our study (Table 1). Secondly, the guidelines to conduct and report cohort studies are more recent than those for randomized trials. The CONSORT statement dates back to 1996  when the STROBE guidelines were first published in 2007 . Interestingly cohort studies published before 2014 were more likely to report HTE than those published after 2013 (univariable OR = 0.5, 95% CI: 0.25–0.97; P value = 0.04). It could be that researchers, with increased awareness of the methodological issues of HTE analyses, are now being more cautious with subgroup analyses. Factors associated with increased reporting of HTE were cohorts published in a high impact factor journal and cohorts reporting on a pharmacological treatment. The reason for increased reporting of HTE in studies published in high impact journal could be that better studies yield more questions among investigators, reviewers and editors. Accordingly, cohort studies published in high impact journals were more frequently likely to pre-specify HTE analyses in the methods than those published in lower impact journals. It has been previously reported that HTE analyses are more frequently reported in pharmacological treatments . Some issues were found in the use of HTE: analyses were not prespecified frequently enough; selection bias were not accounted for by adequate methods very often (propensity scores) .
Contrary to that reported by Sun and colleagues for randomized studies , we did not find an association between the source of funding and the reporting of HTE in the cohort. Because cohort studies are not decisional it could well be that sponsors find little incentive in planning, or in performing in retrospect, subgroup analyses [29, 30].
Furthermore, we found that in high impact journals studies, compared to low impact journals studies, there were more analyses of HTE, with more significant result for the primary outcome. The higher rate of reporting HTE in high impact journals may be a result of the independent efforts of investigators. Alternatively, editors and reviewers in high impact journals may be more inclined to request such analyses than those in journals with a lower impact.
Compared to cohorts the main difference lies in the fact that the strength of association between RCTs funding and reporting of subgroup differed in trials with and without statistically significant primary outcomes . In RCTs without statistically significant results for the primary outcome, industry funded trials were more likely to report subgroup analyses (OR: 2.29, CI (95%):1.30 to 4.72) than non-industry funded trials . Industry funded trials were associated with less frequent prespecifCIation of subgroup hypotheses (31.3% v 38.0%, adjusted OR: 0.49, CI (95%):0.26 to 0.94), and less use of the interaction test for analyses of subgroup effects (41.4% v 49.1%, OR:0.52, CI (95%):0.28 to 0.97) than non-industry funded trials . That is not the case for cohort studies. Our results showed that the source of funding and the main effect of primary outcome was not associated with the HTE analysis. These findings further support our hypothesis that RCTs funded by industry are more likely to look for positive subgroup findings when the results are non significant statistically, and suggest that, compared with non-industry funded trials, the quality of carrying out subgroup analyses is more questionable.
Our study has several limitations. First the search terms for identifying a prospective controlled cohort study are quiet brief and this could possible over estimate all eligible studies from the particular journals; this point can likely result in selection bias . We did not search all medical journals and therefore our findings may not be applicable to journals outside our sample. We did, however, include all core clinical journals. Then we dichotomized the journals as high versus low impact and studies as industry funded versus non industry funded. These categorizations ignore both gradients.
One of the limitation is that if journals were randomly selected within their subgroup (low or high impact), studies themselves were identified in a reverse chronological order and constitute a biased sample of all prospective cohort studies within each journal. This bias probably favors a better reporting of heterogeneity in our sample.
Only 150 cohort studies were analyzed. This could be a limitation to provide precise estimates. However, the precision of a 50% probability with 150 trials is +/−8% wich is reasonable.
We did not classify HTE analyses into descriptive or confirmatory as reported by Varadhan R. and colleagues . Although this would have been an interesting theoretical point, it is actually extremely difficult to differentiate between both analyses in practice.
Another limitation is that journal impact factor stands for various other variables such as notoriety, expertise area (although these are general medical journals), submission guidelines, reviewing and editorial process and quality, etc. By comparing low and high impact journal factors we could not identify precisely which variables have an effect on reporting heterogeneity of treatment effect.
More than 50% of cohort studies published in core clinical journals report some form of heterogeneity of treatment effect analysis. About 20% of cohort studies have adequate methods to account for selection biases. A test for the significance of heterogeneity in the treatment effect is performed in only 18% of cohort studies. Prospective cohort studies published in high impact journals, with larger sample size and longer follow up, studying pharmacological effect of a treatment on a time-to-event primary outcome are associated with more frequent HTE reporting. After multivariable adjustment, the most predictive values associated with reporting HTE were the impact of the journal and the pharmacological study area. Potentially, an important demand will be placed on observational studies to produce evidence to inform decision on some specific subgroup of patients. There is clearly a need for improvement and more clarification of reporting HTE and his analysis .
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BRAF is a human gene that encodes a protein called B-Raf involved in sending signals inside cells that direct cell growth
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Availability of data and materials
The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Conception and design: DB, MD, RP. Acquisition of data: DB, MD, CS. Analysis and interpretation of data: DB, MD, CS, RP. Involved in drafting the manuscript or revising it critically for important intellectual content: DB, MD, CS, RP. Given final approval of the version to be published. Each author should have participated sufficiently in the work to take public responsibility for appropriate portions of the content: DB, MD, CS, RP. Agreed to be accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved: DB, MD, CS, RP.
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Dahan, M., Scemama, C., Porcher, R. et al. Reporting of heterogeneity of treatment effect in cohort studies: a review of the literature. BMC Med Res Methodol 18, 10 (2018). https://doi.org/10.1186/s12874-017-0466-6
- Cohort studies
- Heterogeneity of treatment
- Subgroups analysis
- Heterogeneity of treatment reporting